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PseudoChecker consists in an integrated computational pipeline able to infer the coding status of a given eukaryotic nuclear protein-coding gene in single or multiple species of interest by taking advantage of existent genomic data.
This workshop, to be hosted in the afternoon of Bioinformatics Open Days 2020, is an introduction to differential gene expression analysis of medium-sized single-cell RNA-seq (scRNA-seq) obtained using the 10x Genomics Chromium System. Participants will learn about the basic concepts behind the technology, its applications and concepts, and go through a hands-on exercise where they will perform a re-analysis of a sample of ~3,000 cells from the Mouse Cell Atlas (MCA).
